STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000380705_01325Unannotated protein. (201 aa)    
Predicted Functional Partners:
GCA_000380705_01495
Unannotated protein.
 
 
0.992
GCA_000380705_01318
Unannotated protein.
 
  
 
0.960
GCA_000380705_00706
Unannotated protein.
   
  0.848
GCA_000380705_01109
Unannotated protein.
  
 0.788
GCA_000380705_01361
Unannotated protein.
  
  0.776
GCA_000380705_00213
Unannotated protein.
 
 0.772
GCA_000380705_00525
Unannotated protein.
  
 0.756
GCA_000380705_01555
Unannotated protein.
  
 0.750
GCA_000380705_00710
Unannotated protein.
   
 0.746
GCA_000380705_01111
Unannotated protein.
   
 0.746
Your Current Organism:
Crenarchaeota archaeon SCGC AAA471B05
NCBI taxonomy Id: 1052801
Other names: C. archaeon SCGC AAA471-B05, Crenarchaeota archaeon SCGC AAA471-B05, candidate division YNPFFA archaeon SCGC AAA471-B05
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.