STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000403075_00157Unannotated protein. (368 aa)    
Predicted Functional Partners:
GCA_000403075_00158
Unannotated protein.
 
 0.994
GCA_000403075_01625
Unannotated protein.
 
 0.961
GCA_000403075_01644
Unannotated protein.
  
 0.951
GCA_000403075_00962
Unannotated protein.
  
 0.948
GCA_000403075_00964
Unannotated protein.
 
 0.942
GCA_000403075_01169
Unannotated protein.
    
 0.523
GCA_000403075_01535
Unannotated protein.
    
  0.517
GCA_000403075_01336
Unannotated protein.
  
 
  0.503
GCA_000403075_01089
Unannotated protein.
   
 0.471
GCA_000403075_00310
Unannotated protein.
  
    0.457
Your Current Organism:
Calescamantes bacterium SCGC AAA471M6
NCBI taxonomy Id: 1052810
Other names: C. bacterium SCGC AAA471-M6, Calescamantes bacterium SCGC AAA471-M6, candidate division EM 19 bacterium SCGC AAA471-M6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.