STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000403075_01151Unannotated protein. (638 aa)    
Predicted Functional Partners:
GCA_000403075_01452
Unannotated protein.
  
 
 0.857
GCA_000403075_01248
Unannotated protein.
    
 0.795
GCA_000403075_01150
Unannotated protein.
 
     0.775
GCA_000403075_01082
Unannotated protein.
  
 
 0.746
GCA_000403075_00906
Unannotated protein.
  
 
 0.742
GCA_000403075_00840
Unannotated protein.
   
 
 0.732
GCA_000403075_01164
Unannotated protein.
    
 0.724
GCA_000403075_01045
Unannotated protein.
     
 0.722
GCA_000403075_00239
Unannotated protein.
    
  0.716
GCA_000403075_01042
Unannotated protein.
  
 
 0.711
Your Current Organism:
Calescamantes bacterium SCGC AAA471M6
NCBI taxonomy Id: 1052810
Other names: C. bacterium SCGC AAA471-M6, Calescamantes bacterium SCGC AAA471-M6, candidate division EM 19 bacterium SCGC AAA471-M6
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.