STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000403075_01335Unannotated protein. (1103 aa)    
Predicted Functional Partners:
GCA_000403075_01573
Unannotated protein.
  
     0.696
GCA_000403075_00906
Unannotated protein.
    
  0.690
GCA_000403075_01336
Unannotated protein.
       0.660
GCA_000403075_00669
Unannotated protein.
  
     0.632
GCA_000403075_00979
Unannotated protein.
  
     0.631
GCA_000403075_01394
Unannotated protein.
  
     0.611
GCA_000403075_01077
Unannotated protein.
 
     0.585
GCA_000403075_01320
Unannotated protein.
    
  0.585
GCA_000403075_01389
Unannotated protein.
    
  0.585
GCA_000403075_01641
Unannotated protein.
  
     0.567
Your Current Organism:
Calescamantes bacterium SCGC AAA471M6
NCBI taxonomy Id: 1052810
Other names: C. bacterium SCGC AAA471-M6, Calescamantes bacterium SCGC AAA471-M6, candidate division EM 19 bacterium SCGC AAA471-M6
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