STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000403075_01645Unannotated protein. (273 aa)    
Predicted Functional Partners:
GCA_000403075_00019
Unannotated protein.
    
  0.798
GCA_000403075_00856
Unannotated protein.
    
  0.794
GCA_000403075_01646
Unannotated protein.
       0.790
GCA_000403075_00537
Unannotated protein.
    
 0.746
GCA_000403075_01466
Unannotated protein.
    
 0.746
GCA_000403075_00840
Unannotated protein.
 
 
 0.712
GCA_000403075_00326
Unannotated protein.
 
 
 0.689
GCA_000403075_00181
Unannotated protein.
   
  0.612
GCA_000403075_01647
Unannotated protein.
     
 0.587
GCA_000403075_01289
Unannotated protein.
     
 0.571
Your Current Organism:
Calescamantes bacterium SCGC AAA471M6
NCBI taxonomy Id: 1052810
Other names: C. bacterium SCGC AAA471-M6, Calescamantes bacterium SCGC AAA471-M6, candidate division EM 19 bacterium SCGC AAA471-M6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.