STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AAWM_00109Glycosidase; Belongs to the glycosyl hydrolase 16 family. (403 aa)    
Predicted Functional Partners:
AAWM_03809
Endocytosis protein end4.
    
  0.645
AAWM_07998
Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting.
   
 
 0.645
AAWM_05268
Vacuolar protein sorting-associated protein 29; Belongs to the VPS29 family.
    
 
 0.643
AAWM_09428
Vacuolar protein sorting-associated protein 26.
    
 
 0.643
AAWM_04494
Synaptobrevin homolog 1.
    
 0.633
AAWM_04951
Putative mannose 6-phosphate receptor-like protein C530.09c.
    
 0.633
AAWM_03133
Glycosidase; Belongs to the glycosyl hydrolase 16 family.
  
 
 
0.624
AAWM_06411
Clathrin light chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin light chain family.
    
  0.567
AAWM_09764
AP-1 complex subunit gamma.
     
 0.565
AAWM_09836
Uncharacterized protein.
    
  0.551
Your Current Organism:
Aspergillus awamori
NCBI taxonomy Id: 105351
Other names: A. awamori, ATCC 16877, Aspergillus awamorii, Aspergillus niger var. awamori, Aspergillus niger var. awamorii, CBS 557.65, ITEM 4509
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.