Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AAWM_00240 | AAWM_01349 | A0A401KDQ1 | A0A401KGF7 | COMPASS component SDC1. | Ubiquitin-40S ribosomal protein S27a. | 0.878 |
AAWM_00240 | AAWM_01734 | A0A401KDQ1 | A0A401KI26 | COMPASS component SDC1. | Uncharacterized protein. | 0.928 |
AAWM_00240 | AAWM_03142 | A0A401KDQ1 | A0A401KLX5 | COMPASS component SDC1. | WD repeat-containing protein 5. | 0.945 |
AAWM_00240 | AAWM_04904 | A0A401KDQ1 | A0A401KS03 | COMPASS component SDC1. | Histone H4.2; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. | 0.897 |
AAWM_00240 | AAWM_05193 | A0A401KDQ1 | A0A401KSS7 | COMPASS component SDC1. | Histone-lysine N-methyltransferase, H3 lysine-4 specific; Catalytic component of the COMPASS (Set1C) complex that specifically mono-, di- and trimethylates histone H3 to form H3K4me1/2/3, which subsequently plays a role in telomere length maintenance and transcription elongation regulation. | 0.972 |
AAWM_00240 | AAWM_06443 | A0A401KDQ1 | A0A401KW74 | COMPASS component SDC1. | Polyubiquitin. | 0.878 |
AAWM_00240 | AAWM_06897 | A0A401KDQ1 | A0A401KXR1 | COMPASS component SDC1. | BZIP domain-containing protein. | 0.878 |
AAWM_00240 | AAWM_09020 | A0A401KDQ1 | A0A401L3P6 | COMPASS component SDC1. | Set1 complex component swd1. | 0.995 |
AAWM_00240 | AAWM_09742 | A0A401KDQ1 | A0A401L5U2 | COMPASS component SDC1. | Ubiquitin-60S ribosomal protein L40. | 0.906 |
AAWM_00240 | AAWM_09958 | A0A401KDQ1 | A0A401L681 | COMPASS component SDC1. | Set1 complex component ash2. | 0.995 |
AAWM_01349 | AAWM_00240 | A0A401KGF7 | A0A401KDQ1 | Ubiquitin-40S ribosomal protein S27a. | COMPASS component SDC1. | 0.878 |
AAWM_01349 | AAWM_01734 | A0A401KGF7 | A0A401KI26 | Ubiquitin-40S ribosomal protein S27a. | Uncharacterized protein. | 0.703 |
AAWM_01349 | AAWM_03142 | A0A401KGF7 | A0A401KLX5 | Ubiquitin-40S ribosomal protein S27a. | WD repeat-containing protein 5. | 0.630 |
AAWM_01349 | AAWM_04904 | A0A401KGF7 | A0A401KS03 | Ubiquitin-40S ribosomal protein S27a. | Histone H4.2; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. | 0.955 |
AAWM_01349 | AAWM_05193 | A0A401KGF7 | A0A401KSS7 | Ubiquitin-40S ribosomal protein S27a. | Histone-lysine N-methyltransferase, H3 lysine-4 specific; Catalytic component of the COMPASS (Set1C) complex that specifically mono-, di- and trimethylates histone H3 to form H3K4me1/2/3, which subsequently plays a role in telomere length maintenance and transcription elongation regulation. | 0.887 |
AAWM_01349 | AAWM_06443 | A0A401KGF7 | A0A401KW74 | Ubiquitin-40S ribosomal protein S27a. | Polyubiquitin. | 0.964 |
AAWM_01349 | AAWM_09020 | A0A401KGF7 | A0A401L3P6 | Ubiquitin-40S ribosomal protein S27a. | Set1 complex component swd1. | 0.949 |
AAWM_01349 | AAWM_09742 | A0A401KGF7 | A0A401L5U2 | Ubiquitin-40S ribosomal protein S27a. | Ubiquitin-60S ribosomal protein L40. | 0.997 |
AAWM_01349 | AAWM_09958 | A0A401KGF7 | A0A401L681 | Ubiquitin-40S ribosomal protein S27a. | Set1 complex component ash2. | 0.878 |
AAWM_01734 | AAWM_00240 | A0A401KI26 | A0A401KDQ1 | Uncharacterized protein. | COMPASS component SDC1. | 0.928 |
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