STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AAWM_00296SEC14 cytosolic factor. (432 aa)    
Predicted Functional Partners:
AAWM_09567
UPF0744 protein C106.03.
    
 0.660
AAWM_09764
AP-1 complex subunit gamma.
    
 0.639
AAWM_07085
AP-1 complex subunit sigma-1.
     
 0.601
AAWM_02474
Phosphatidylinositol transfer protein sfh5.
    
 
 0.595
AAWM_00258
AP-1 complex subunit mu-1; Belongs to the adaptor complexes medium subunit family.
     
 0.594
AAWM_09981
Diacylglycerol O-acyltransferase 2A.
   
 
  0.588
AAWM_05251
Choline-phosphate cytidylyltransferase.
    
 
 0.584
AAWM_09132
Methionine aminopeptidase 2; Cotranslationally removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met- Ala-, Cys, Gly, Pro, Ser, Thr, or Val).
    
 
 0.571
AAWM_07728
Protein phosphatase; Belongs to the PP2C family.
    
   0.564
AAWM_09976
AP-3 complex subunit delta-1.
    
 0.547
Your Current Organism:
Aspergillus awamori
NCBI taxonomy Id: 105351
Other names: A. awamori, ATCC 16877, Aspergillus awamorii, Aspergillus niger var. awamori, Aspergillus niger var. awamorii, CBS 557.65, ITEM 4509
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.