STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AAWM_00373L-saccharopine oxidase. (435 aa)    
Predicted Functional Partners:
AAWM_10726
Dimethylglycine oxidase.
  
 0.894
AAWM_05540
Dimethylglycine oxidase.
  
 0.883
AAWM_05267
Alanine--glyoxylate aminotransferase 1.
  
 
 0.868
AAWM_08099
Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family.
    
 0.844
AAWM_10976
Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family.
    
 0.844
AAWM_02339
Glycine cleavage system P protein; The glycine cleavage system catalyzes the degradation of glycine.
   
 
 0.842
AAWM_10686
Low-specificity L-threonine aldolase.
     
 0.839
AAWM_02026
D-amino-acid oxidase.
   
 
  0.832
AAWM_09769
D-amino-acid oxidase.
   
 
  0.827
AAWM_05420
Probable aminomethyltransferase, mitochondrial.
  
 0.604
Your Current Organism:
Aspergillus awamori
NCBI taxonomy Id: 105351
Other names: A. awamori, ATCC 16877, Aspergillus awamorii, Aspergillus niger var. awamori, Aspergillus niger var. awamorii, CBS 557.65, ITEM 4509
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.