STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AAWM_00386Coiled-coil domain-containing protein 97. (209 aa)    
Predicted Functional Partners:
AAWM_00801
Splicing factor 3B subunit 6-like protein.
    
 
 0.743
AAWM_04948
Splicing factor subunit; Belongs to the SF3B5 family.
    
 
 0.712
AAWM_01457
U2 snRNP component prp10.
    
 
 0.672
AAWM_05847
Pre-mRNA-splicing factor rse1.
    
 
 0.589
AAWM_09745
CPSF_A domain-containing protein.
    
 
 0.589
AAWM_03773
Pre-mRNA-splicing factor sap114.
   
 
 0.552
AAWM_09442
Pre-mRNA-splicing factor sap62.
   
 
 0.526
AAWM_10925
Spliceosome-associated protein 49.
    
 
 0.509
AAWM_01083
Pre-mRNA-splicing factor sap61.
   
 
 0.495
AAWM_02551
CID domain-containing protein.
   
 
 0.412
Your Current Organism:
Aspergillus awamori
NCBI taxonomy Id: 105351
Other names: A. awamori, ATCC 16877, Aspergillus awamorii, Aspergillus niger var. awamori, Aspergillus niger var. awamorii, CBS 557.65, ITEM 4509
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.