STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AAWM_00552RNA-binding protein 8A. (160 aa)    
Predicted Functional Partners:
AAWM_01082
ATP-dependent RNA helicase fal1; Belongs to the DEAD box helicase family.
   
 0.998
AAWM_05429
Protein mago nashi homolog.
   
 0.998
AAWM_03137
Partner of Y14 and mago.
    
 0.997
AAWM_00225
Regulator of nonsense transcripts 2.
    
 0.985
AAWM_02436
RNA-binding protein with serine-rich domain 1.
   
 0.983
AAWM_04461
ATP-dependent RNA helicase sub2.
   
 0.979
AAWM_11038
Nuclear cap-binding protein subunit 2.
   
0.979
AAWM_02033
mRNA export protein mlo3.
   
 0.978
AAWM_05633
Regulator of nonsense transcripts 1 homolog.
    
 0.964
AAWM_00995
ATP-dependent RNA helicase eIF4A; Belongs to the DEAD box helicase family.
    
 0.942
Your Current Organism:
Aspergillus awamori
NCBI taxonomy Id: 105351
Other names: A. awamori, ATCC 16877, Aspergillus awamorii, Aspergillus niger var. awamori, Aspergillus niger var. awamorii, CBS 557.65, ITEM 4509
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.