STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AAWM_00627ENTH domain-containing protein C19F8.03c. (614 aa)    
Predicted Functional Partners:
AAWM_05524
Nipped-B-like protein B.
    
 0.992
AAWM_09550
Uncharacterized calcium-binding protein C800.10c.
    
 0.914
AAWM_03809
Endocytosis protein end4.
    
 0.910
AAWM_07137
AP-2 complex subunit mu; Belongs to the adaptor complexes medium subunit family.
    
 0.885
AAWM_09742
Ubiquitin-60S ribosomal protein L40.
    
  0.870
AAWM_04964
Serine/threonine-protein kinase ppk30.
    
 0.865
AAWM_06411
Clathrin light chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin light chain family.
    
 0.865
AAWM_06443
Polyubiquitin.
    
  0.850
AAWM_05994
Epsin-1.
   
0.845
AAWM_02392
AP-2 complex subunit alpha; Adaptins are components of the adaptor complexes which link clathrin to receptors in coated vesicles. Clathrin-associated protein complexes are believed to interact with the cytoplasmic tails of membrane proteins, leading to their selection and concentration.
    
 0.835
Your Current Organism:
Aspergillus awamori
NCBI taxonomy Id: 105351
Other names: A. awamori, ATCC 16877, Aspergillus awamorii, Aspergillus niger var. awamori, Aspergillus niger var. awamorii, CBS 557.65, ITEM 4509
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.