STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AAWM_00742Cellular nucleic acid-binding protein homolog. (180 aa)    
Predicted Functional Partners:
AAWM_06815
ATP-dependent RNA helicase mtr4.
   
 
 0.744
AAWM_03859
Non-canonical poly(A) RNA polymerase PAPD5.
   
 
 0.670
AAWM_10022
Poly(A) RNA polymerase cid14.
   
 
 0.670
AAWM_02450
TFIIH basal transcription factor complex p47 subunit.
 
  
   0.647
AAWM_04938
40S ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family.
   
   0.600
AAWM_07941
Putative ATP-dependent RNA helicase C550.03c.
   
 
 0.578
AAWM_00220
Elongation factor 3.
    
   0.574
AAWM_10397
Probable RNA-binding protein sce3.
   
 
 0.570
AAWM_00759
rRNA methyltransferase 2, mitochondrial.
   
 
 0.563
AAWM_00741
F-box protein pof12.
 
      0.555
Your Current Organism:
Aspergillus awamori
NCBI taxonomy Id: 105351
Other names: A. awamori, ATCC 16877, Aspergillus awamorii, Aspergillus niger var. awamori, Aspergillus niger var. awamorii, CBS 557.65, ITEM 4509
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.