STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AAWM_00928Nuclear localization sequence-binding protein. (539 aa)    
Predicted Functional Partners:
AAWM_09058
rRNA 2'-O-methyltransferase fibrillarin.
   
 
 0.989
AAWM_08087
Nucleolar protein 56.
   
 
 0.988
AAWM_01658
ATP-dependent RNA helicase dbp2.
   
 
 0.953
AAWM_06321
Pre-rRNA-processing protein esf2.
   
   0.925
AAWM_05077
Protein arginine N-methyltransferase 1; Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family.
   
 
 0.912
AAWM_01152
Nucleolar protein 58.
   
 
 0.899
AAWM_07631
Centromere/microtubule-binding protein cbf5.
   
 
 0.897
AAWM_05385
Nuclear GTP-binding protein NUG1.
   
 
 0.891
AAWM_09262
H/ACA ribonucleoprotein complex subunit; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ("psi") residues may serve to stabilize the conformation of rRNAs.
   
 
 0.890
AAWM_09973
U3 small nucleolar RNA-associated protein 21 homolog.
   
   0.883
Your Current Organism:
Aspergillus awamori
NCBI taxonomy Id: 105351
Other names: A. awamori, ATCC 16877, Aspergillus awamorii, Aspergillus niger var. awamori, Aspergillus niger var. awamorii, CBS 557.65, ITEM 4509
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.