STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AAWM_00834Kinetochore protein Sos7. (287 aa)    
Predicted Functional Partners:
AAWM_00532
60S ribosomal protein L34-B.
  
 0.994
AAWM_03692
60S ribosomal protein L26-1.
  
 0.994
AAWM_05064
60S ribosomal protein L27; Belongs to the eukaryotic ribosomal protein eL27 family.
  
 0.994
AAWM_05931
60S ribosomal protein L31.
   
 0.994
AAWM_07637
60S ribosomal protein L25.
   
 0.994
AAWM_09604
60S ribosomal protein L29; Belongs to the eukaryotic ribosomal protein eL29 family.
   
 0.994
AAWM_10793
60S ribosomal protein L14-A.
  
 0.994
AAWM_00832
60S ribosomal protein L21-A.
   
 0.993
AAWM_00965
60S ribosomal protein L33-B.
   
 0.993
AAWM_04475
60S ribosomal protein L24.
   
 0.993
Your Current Organism:
Aspergillus awamori
NCBI taxonomy Id: 105351
Other names: A. awamori, ATCC 16877, Aspergillus awamorii, Aspergillus niger var. awamori, Aspergillus niger var. awamorii, CBS 557.65, ITEM 4509
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.