STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AAWM_00988LETM1 domain-containing protein mdm28, mitochondrial. (816 aa)    
Predicted Functional Partners:
AAWM_01409
40S ribosomal protein S14; Belongs to the universal ribosomal protein uS11 family.
    
   0.682
AAWM_10936
37S ribosomal protein S10, mitochondrial.
    
   0.665
AAWM_09341
Sorting nexin-4.
 
      0.663
AAWM_00478
37S ribosomal protein MRP2, mitochondrial.
    
   0.662
AAWM_03987
40S ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family.
    
 
 0.652
AAWM_05064
60S ribosomal protein L27; Belongs to the eukaryotic ribosomal protein eL27 family.
 
  
   0.643
AAWM_00392
54S ribosomal protein L22, mitochondrial; Belongs to the universal ribosomal protein uL22 family.
   
 
 0.628
AAWM_01393
40S ribosomal protein S7.
    
 
 0.620
AAWM_07571
60S ribosomal protein L2.
    
 
 0.619
AAWM_00810
Cell division control protein 42 homolog.
    
  0.610
Your Current Organism:
Aspergillus awamori
NCBI taxonomy Id: 105351
Other names: A. awamori, ATCC 16877, Aspergillus awamorii, Aspergillus niger var. awamori, Aspergillus niger var. awamorii, CBS 557.65, ITEM 4509
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.