STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AAWM_01224Vesicular-fusion protein sec18. (817 aa)    
Predicted Functional Partners:
AAWM_02640
Protein sly1; Belongs to the STXBP/unc-18/SEC1 family.
   
 0.990
AAWM_01725
Probable vesicular-fusion protein sec17 homolog.
   
 0.987
AAWM_03976
Protein SSO2.
    
 0.975
AAWM_06820
Syntaxin-22; Belongs to the syntaxin family.
   
 0.969
AAWM_06345
Synaptobrevin homolog YKT6; Belongs to the synaptobrevin family.
    
 0.958
AAWM_04494
Synaptobrevin homolog 1.
   
 0.940
AAWM_01458
Protein transport protein sec9.
   
 
 0.937
AAWM_10817
Protein transport protein sec22; Belongs to the synaptobrevin family.
    
 0.929
AAWM_00720
Protein transport protein BET1.
    
 0.916
AAWM_00907
Integral membrane protein sed5.
    
 0.908
Your Current Organism:
Aspergillus awamori
NCBI taxonomy Id: 105351
Other names: A. awamori, ATCC 16877, Aspergillus awamorii, Aspergillus niger var. awamori, Aspergillus niger var. awamorii, CBS 557.65, ITEM 4509
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.