STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AAWM_01431Protein CSF1. (3206 aa)    
Predicted Functional Partners:
AAWM_01433
Elongation factor 2.
 
      0.739
AAWM_07661
116 kDa U5 small nuclear ribonucleoprotein component.
 
      0.571
AAWM_06551
Vacuolar protein sorting-associated protein; May be involved in recycling of membrane proteins between an endocytic compartment and the TGN; Belongs to the VPS13 family.
   
 
 0.513
AAWM_09427
Protein MON2.
   
    0.450
AAWM_05609
Chromatin modification-related protein EAF7.
    
   0.449
AAWM_01097
Transcription-associated protein 1; Belongs to the PI3/PI4-kinase family.
   
   0.447
AAWM_02045
Maintenance of telomere capping protein 2.
  
   
 0.440
AAWM_10852
E3 ubiquitin protein ligase.
    
   0.426
Your Current Organism:
Aspergillus awamori
NCBI taxonomy Id: 105351
Other names: A. awamori, ATCC 16877, Aspergillus awamorii, Aspergillus niger var. awamori, Aspergillus niger var. awamorii, CBS 557.65, ITEM 4509
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.