Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AAWM_00145 | AAWM_00945 | A0A401KD71 | A0A401KFE2 | 5-formyltetrahydrofolate cyclo-ligase. | C-1-tetrahydrofolate synthase, cytoplasmic. | 0.955 |
AAWM_00145 | AAWM_01849 | A0A401KD71 | A0A401KHX5 | 5-formyltetrahydrofolate cyclo-ligase. | NAD_binding_9 domain-containing protein. | 0.752 |
AAWM_00145 | AAWM_07794 | A0A401KD71 | A0A401KZU2 | 5-formyltetrahydrofolate cyclo-ligase. | Methylenetetrahydrofolate dehydrogenase. | 0.944 |
AAWM_00945 | AAWM_00145 | A0A401KFE2 | A0A401KD71 | C-1-tetrahydrofolate synthase, cytoplasmic. | 5-formyltetrahydrofolate cyclo-ligase. | 0.955 |
AAWM_00945 | AAWM_01116 | A0A401KFE2 | A0A401KG53 | C-1-tetrahydrofolate synthase, cytoplasmic. | Phosphoribosylformylglycinamidine synthase. | 0.889 |
AAWM_00945 | AAWM_01849 | A0A401KFE2 | A0A401KHX5 | C-1-tetrahydrofolate synthase, cytoplasmic. | NAD_binding_9 domain-containing protein. | 0.785 |
AAWM_00945 | AAWM_02387 | A0A401KFE2 | A0A401KK32 | C-1-tetrahydrofolate synthase, cytoplasmic. | Thymidylate synthase. | 0.814 |
AAWM_00945 | AAWM_03751 | A0A401KFE2 | A0A401KNP6 | C-1-tetrahydrofolate synthase, cytoplasmic. | Dihydrofolate reductase. | 0.806 |
AAWM_00945 | AAWM_06915 | A0A401KFE2 | A0A401KXQ0 | C-1-tetrahydrofolate synthase, cytoplasmic. | Probable thymidylate synthase. | 0.932 |
AAWM_00945 | AAWM_07794 | A0A401KFE2 | A0A401KZU2 | C-1-tetrahydrofolate synthase, cytoplasmic. | Methylenetetrahydrofolate dehydrogenase. | 0.958 |
AAWM_00945 | AAWM_08221 | A0A401KFE2 | A0A401L151 | C-1-tetrahydrofolate synthase, cytoplasmic. | 25S rRNA (Cytosine-C(5))-methyltransferase nop2; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. | 0.639 |
AAWM_00945 | AAWM_09063 | A0A401KFE2 | A0A401L3V0 | C-1-tetrahydrofolate synthase, cytoplasmic. | Multisite-specific tRNA:(Cytosine-C(5))-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. | 0.517 |
AAWM_00945 | AAWM_09247 | A0A401KFE2 | A0A401L4E3 | C-1-tetrahydrofolate synthase, cytoplasmic. | 25S rRNA (Cytosine-C(5))-methyltransferase rcm1; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. | 0.468 |
AAWM_01116 | AAWM_00945 | A0A401KG53 | A0A401KFE2 | Phosphoribosylformylglycinamidine synthase. | C-1-tetrahydrofolate synthase, cytoplasmic. | 0.889 |
AAWM_01116 | AAWM_01849 | A0A401KG53 | A0A401KHX5 | Phosphoribosylformylglycinamidine synthase. | NAD_binding_9 domain-containing protein. | 0.757 |
AAWM_01116 | AAWM_07794 | A0A401KG53 | A0A401KZU2 | Phosphoribosylformylglycinamidine synthase. | Methylenetetrahydrofolate dehydrogenase. | 0.748 |
AAWM_01849 | AAWM_00145 | A0A401KHX5 | A0A401KD71 | NAD_binding_9 domain-containing protein. | 5-formyltetrahydrofolate cyclo-ligase. | 0.752 |
AAWM_01849 | AAWM_00945 | A0A401KHX5 | A0A401KFE2 | NAD_binding_9 domain-containing protein. | C-1-tetrahydrofolate synthase, cytoplasmic. | 0.785 |
AAWM_01849 | AAWM_01116 | A0A401KHX5 | A0A401KG53 | NAD_binding_9 domain-containing protein. | Phosphoribosylformylglycinamidine synthase. | 0.757 |
AAWM_01849 | AAWM_02387 | A0A401KHX5 | A0A401KK32 | NAD_binding_9 domain-containing protein. | Thymidylate synthase. | 0.809 |
page 1 of 4