STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AAWM_02025rRNA-processing protein FCF1 homolog. (189 aa)    
Predicted Functional Partners:
AAWM_09028
Probable U3 small nucleolar RNA-associated protein 11.
   
 0.998
AAWM_01600
KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.
   
 0.997
AAWM_03824
Ribosomal RNA small subunit methyltransferase NEP1.
   
 0.997
AAWM_05445
Something about silencing protein 10.
   
 0.997
AAWM_01723
Probable U3 small nucleolar RNA-associated protein 7.
   
 0.996
AAWM_01152
Nucleolar protein 58.
   
 0.994
AAWM_03154
U3 small nucleolar RNA-associated protein 20.
   
 0.994
AAWM_07685
Probable nucleolar complex protein 14.
   
 0.994
AAWM_00833
40S ribosomal protein S9; Belongs to the universal ribosomal protein uS4 family.
   
 0.993
AAWM_01437
Ribosome biogenesis protein bms1.
   
 0.993
Your Current Organism:
Aspergillus awamori
NCBI taxonomy Id: 105351
Other names: A. awamori, ATCC 16877, Aspergillus awamorii, Aspergillus niger var. awamori, Aspergillus niger var. awamorii, CBS 557.65, ITEM 4509
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.