STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AAWM_02396Pre-mRNA-splicing factor; Involved in mRNA splicing where it associates with cdc5 and the other cwf proteins as part of the spliceosome. (1418 aa)    
Predicted Functional Partners:
AAWM_02054
Pre-mRNA-processing factor 19.
    
 0.997
AAWM_04880
Pre-mRNA-splicing factor syf1.
   
 0.997
AAWM_05349
Pre-mRNA-splicing factor clf1.
    
 0.993
AAWM_02305
Pre-mRNA-splicing factor slt11.
    
  0.991
AAWM_01713
Peptidyl-prolyl cis-trans isomerase E.
    
 0.990
AAWM_07639
Pre-mRNA-splicing factor cwf14.
    
  0.990
AAWM_02574
Pre-mRNA-processing protein 45.
    
  0.987
AAWM_07661
116 kDa U5 small nuclear ribonucleoprotein component.
   
 
 0.983
AAWM_00829
Pre-mRNA-splicing factor cef1.
   
 
 0.980
AAWM_00531
Pre-mRNA-processing-splicing factor 8.
   
 
 0.975
Your Current Organism:
Aspergillus awamori
NCBI taxonomy Id: 105351
Other names: A. awamori, ATCC 16877, Aspergillus awamorii, Aspergillus niger var. awamori, Aspergillus niger var. awamorii, CBS 557.65, ITEM 4509
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.