STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AAWM_02649Uncharacterized protein. (548 aa)    
Predicted Functional Partners:
AAWM_03759
Pre-rRNA-processing protein crb3/ipi3.
   
  0.499
NOP7
Pescadillo homolog; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
  0.484
AAWM_01409
40S ribosomal protein S14; Belongs to the universal ribosomal protein uS11 family.
    
  0.479
AAWM_04409
Pre-rRNA-processing protein ipi1.
    
  0.477
AAWM_09767
Signaling protein YkoW.
    
  0.472
AAWM_00484
Polynucleotide 5'-hydroxyl-kinase grc3.
    
  0.448
AAWM_11112
60S ribosomal protein L30-2.
    
  0.438
AAWM_05385
Nuclear GTP-binding protein NUG1.
   
  0.430
AAWM_00042
Uncharacterized protein.
  
 
  0.424
AAWM_07112
Alpha-actinin-like protein 1.
    
  0.422
Your Current Organism:
Aspergillus awamori
NCBI taxonomy Id: 105351
Other names: A. awamori, ATCC 16877, Aspergillus awamorii, Aspergillus niger var. awamori, Aspergillus niger var. awamorii, CBS 557.65, ITEM 4509
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.