STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AAWM_0257760S ribosomal protein L4-B. (372 aa)    
Predicted Functional Partners:
AAWM_04938
40S ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family.
  
 0.995
AAWM_05616
60S ribosomal protein L5.
  
 0.995
AAWM_07571
60S ribosomal protein L2.
 
 0.995
AAWM_00833
40S ribosomal protein S9; Belongs to the universal ribosomal protein uS4 family.
  
 0.994
AAWM_01409
40S ribosomal protein S14; Belongs to the universal ribosomal protein uS11 family.
  
 0.994
AAWM_01559
60S ribosomal protein L3; Belongs to the universal ribosomal protein uL3 family.
  
 0.994
AAWM_02351
60S ribosomal protein L7.
  
 0.994
AAWM_03987
40S ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family.
  
 0.994
AAWM_05118
40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family.
   
 0.994
AAWM_05064
60S ribosomal protein L27; Belongs to the eukaryotic ribosomal protein eL27 family.
  
 0.994
Your Current Organism:
Aspergillus awamori
NCBI taxonomy Id: 105351
Other names: A. awamori, ATCC 16877, Aspergillus awamorii, Aspergillus niger var. awamori, Aspergillus niger var. awamorii, CBS 557.65, ITEM 4509
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.