STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AAWM_03055Homogentisate 1,2-dioxygenase. (488 aa)    
Predicted Functional Partners:
AAWM_03185
4-hydroxyphenylpyruvate dioxygenase.
  
 0.978
AAWM_03181
Maleylacetoacetate isomerase; Belongs to the GST superfamily.
  
 
 0.948
AAWM_03183
Homogentisate 1,2-dioxygenase.
  
  
 
0.883
AAWM_00164
4-hydroxyphenylpyruvate dioxygenase.
  
 0.881
AAWM_06841
Probable 4-hydroxyphenylpyruvate dioxygenase 2.
  
 0.881
AAWM_02707
3-dehydroshikimate dehydratase.
     
 0.841
AAWM_05479
3-dehydroshikimate dehydratase.
     
 0.834
AAWM_06367
3-dehydroshikimate dehydratase.
     
 0.834
AAWM_09737
Homogentisate 1,2-dioxygenase.
  
  
 
0.813
AAWM_03182
Fumarylacetoacetase.
 
 
 0.799
Your Current Organism:
Aspergillus awamori
NCBI taxonomy Id: 105351
Other names: A. awamori, ATCC 16877, Aspergillus awamorii, Aspergillus niger var. awamori, Aspergillus niger var. awamorii, CBS 557.65, ITEM 4509
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.