STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AAWM_03073Tetratricopeptide repeat protein 1. (275 aa)    
Predicted Functional Partners:
AAWM_09676
Protein phosphatase 1 regulatory subunit SDS22.
   
    0.615
AAWM_06839
Vesicle-associated membrane protein-associated protein C16G5.05c.
    
 
 0.540
AAWM_02472
Protein SGT1 homolog A.
   
  
 0.523
AAWM_10448
TNF receptor-associated factor 5.
    
   0.444
AAWM_07096
Mitochondrial import receptor subunit tom70.
      
 0.436
AAWM_05119
Meiotically up-regulated gene 70 protein.
      
 0.434
AAWM_05586
Chitin synthase D.
    
 
 0.410
Your Current Organism:
Aspergillus awamori
NCBI taxonomy Id: 105351
Other names: A. awamori, ATCC 16877, Aspergillus awamorii, Aspergillus niger var. awamori, Aspergillus niger var. awamorii, CBS 557.65, ITEM 4509
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.