STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AAWM_0314440S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family. (176 aa)    
Predicted Functional Partners:
AAWM_00238
40S ribosomal protein S13; Belongs to the universal ribosomal protein uS15 family.
   
 0.999
AAWM_01414
40S ribosomal protein S16; Belongs to the universal ribosomal protein uS9 family.
   
 0.999
AAWM_04938
40S ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family.
   
 0.999
AAWM_05008
40S ribosomal protein S19.
   
 0.999
AAWM_05118
40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family.
   
 0.999
AAWM_05264
40S ribosomal protein S23; Belongs to the universal ribosomal protein uS12 family.
   
 0.999
AAWM_05984
40S ribosomal protein S10-B.
   
 0.999
AAWM_09722
40S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family.
   
 0.999
AAWM_10058
40S ribosomal protein S28.
   
 0.999
AAWM_00478
37S ribosomal protein MRP2, mitochondrial.
   
 0.998
Your Current Organism:
Aspergillus awamori
NCBI taxonomy Id: 105351
Other names: A. awamori, ATCC 16877, Aspergillus awamorii, Aspergillus niger var. awamori, Aspergillus niger var. awamorii, CBS 557.65, ITEM 4509
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.