STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AAWM_03280Uncharacterized protein Rv1998c. (264 aa)    
Predicted Functional Partners:
AAWM_10778
Malate synthase; Belongs to the malate synthase family.
   
 
 0.770
AAWM_05267
Alanine--glyoxylate aminotransferase 1.
  
 
 0.682
AAWM_02460
Citrate synthase; Belongs to the citrate synthase family.
  
 0.630
AAWM_06126
Citrate synthase; Belongs to the citrate synthase family.
  
 0.630
AAWM_09224
Citrate synthase; Belongs to the citrate synthase family.
  
 0.630
AAWM_10773
Citrate synthase; Belongs to the citrate synthase family.
  
 0.630
AAWM_02090
Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial; Iron-sulfur protein (IP) subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q).
    
  0.602
AAWM_01038
Aconitate hydratase, mitochondrial; Belongs to the aconitase/IPM isomerase family.
  
 0.565
AAWM_01004
Homocitrate dehydratase, mitochondrial.
  
 0.565
AAWM_01610
3-isopropylmalate dehydratase; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate.
    
 0.565
Your Current Organism:
Aspergillus awamori
NCBI taxonomy Id: 105351
Other names: A. awamori, ATCC 16877, Aspergillus awamorii, Aspergillus niger var. awamori, Aspergillus niger var. awamorii, CBS 557.65, ITEM 4509
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.