STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AAWM_03334ATP-dependent zinc metalloprotease FtsH. (596 aa)    
Predicted Functional Partners:
AAWM_09574
Nuclear protein localization protein 4.
   
 0.850
AAWM_10877
Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family.
   
 0.848
AAWM_07722
Protein OS-9 homolog.
    
 0.846
AAWM_10042
UBX domain-containing protein 5.
    
 0.842
AAWM_03866
Putative ubiquitin thioesterase otu1.
   
 0.837
AAWM_01725
Probable vesicular-fusion protein sec17 homolog.
    
 0.805
AAWM_09742
Ubiquitin-60S ribosomal protein L40.
   
 0.805
AAWM_10698
26S proteasome non-ATPase regulatory subunit 4 homolog.
   
 0.805
AAWM_07600
UV excision repair protein rhp23.
    
 0.801
AAWM_02422
Ubiquitin fusion degradation protein 1 homolog.
    
 0.798
Your Current Organism:
Aspergillus awamori
NCBI taxonomy Id: 105351
Other names: A. awamori, ATCC 16877, Aspergillus awamorii, Aspergillus niger var. awamori, Aspergillus niger var. awamorii, CBS 557.65, ITEM 4509
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.