STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AAWM_03347Uncharacterized protein. (571 aa)    
Predicted Functional Partners:
AAWM_08030
Pre-mRNA-splicing factor srp2.
    
 0.569
AAWM_10943
Pre-mRNA-splicing factor srp1.
    
 0.569
AAWM_00829
Pre-mRNA-splicing factor cef1.
    
   0.561
AAWM_02057
U1 small nuclear ribonucleoprotein 70 kDa homolog.
    
 0.444
AAWM_08190
RNA-binding post-transcriptional regulator cip2.
    
  0.431
AAWM_11104
Cleavage stimulation factor subunit 2.
    
  0.431
Your Current Organism:
Aspergillus awamori
NCBI taxonomy Id: 105351
Other names: A. awamori, ATCC 16877, Aspergillus awamorii, Aspergillus niger var. awamori, Aspergillus niger var. awamorii, CBS 557.65, ITEM 4509
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.