STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AAWM_03484Lovastatin diketide synthase LovF. (2576 aa)    
Predicted Functional Partners:
AAWM_01821
Linear gramicidin synthase subunit D.
   
 0.732
AAWM_11040
L-aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase.
   
 0.644
AAWM_10404
4HBT domain-containing protein.
   
 0.614
AAWM_09460
Lovastatin diketide synthase LovF.
 
    
0.591
AAWM_04268
Linear gramicidin synthase subunit D.
   
 0.585
AAWM_04335
Linear gramicidin synthase subunit D.
 
 
 0.585
AAWM_06458
Nonribosomal peptide synthetase 7.
  
  0.583
AAWM_03513
Nonribosomal peptide synthetase 14.
 
 
  0.576
AAWM_06926
Malonyl CoA-acyl carrier protein transacylase.
  
 0.562
AAWM_04166
Nonribosomal peptide synthetase 8.
   
 0.503
Your Current Organism:
Aspergillus awamori
NCBI taxonomy Id: 105351
Other names: A. awamori, ATCC 16877, Aspergillus awamorii, Aspergillus niger var. awamori, Aspergillus niger var. awamorii, CBS 557.65, ITEM 4509
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.