STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AAWM_03708Putative dehydratase IlvD1. (547 aa)    
Predicted Functional Partners:
AAWM_01407
Branched-chain-amino-acid aminotransferase; Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family.
  
 0.929
AAWM_06898
Branched-chain-amino-acid aminotransferase; Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family.
  
 0.929
AAWM_09484
Putative branched-chain-amino-acid aminotransferase TOXF.
  
 0.929
AAWM_08990
2-isopropylmalate synthase.
  
 
 0.904
AAWM_02801
Putative branched-chain-amino-acid aminotransferase TOXF.
  
 0.873
AAWM_07418
Putative branched-chain-amino-acid aminotransferase TOXF.
  
 0.873
AAWM_03549
3-methyl-2-oxobutanoate hydroxymethyltransferase; Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha- ketoisovalerate to form ketopantoate.
     
 0.861
AAWM_02658
Ketol-acid reductoisomerase, mitochondrial; Belongs to the ketol-acid reductoisomerase family.
   
 0.849
AAWM_09029
Histidine biosynthesis trifunctional protein.
  
  
 0.783
AAWM_04106
Putative branched-chain-amino-acid aminotransferase TOXF.
  
 0.782
Your Current Organism:
Aspergillus awamori
NCBI taxonomy Id: 105351
Other names: A. awamori, ATCC 16877, Aspergillus awamorii, Aspergillus niger var. awamori, Aspergillus niger var. awamorii, CBS 557.65, ITEM 4509
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