STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AAWM_04088Uncharacterized protein. (457 aa)    
Predicted Functional Partners:
AAWM_05022
40S ribosomal protein S12; Belongs to the eukaryotic ribosomal protein eS12 family.
    
 
 0.641
AAWM_07600
UV excision repair protein rhp23.
   
   0.612
AAWM_07887
Uncharacterized protein.
    
 
 0.610
AAWM_02366
Peptidylprolyl isomerase.
    
   0.604
AAWM_04779
Peptidylprolyl isomerase.
    
   0.604
AAWM_10058
40S ribosomal protein S28.
   
   0.598
AAWM_00238
40S ribosomal protein S13; Belongs to the universal ribosomal protein uS15 family.
    
   0.591
AAWM_03987
40S ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family.
    
   0.591
AAWM_05008
40S ribosomal protein S19.
    
   0.591
AAWM_07637
60S ribosomal protein L25.
    
   0.591
Your Current Organism:
Aspergillus awamori
NCBI taxonomy Id: 105351
Other names: A. awamori, ATCC 16877, Aspergillus awamorii, Aspergillus niger var. awamori, Aspergillus niger var. awamorii, CBS 557.65, ITEM 4509
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.