STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AAWM_04483D-xylose 1-dehydrogenase (NADP(+)) 2. (434 aa)    
Predicted Functional Partners:
AAWM_10151
3-dehydroshikimate dehydratase.
  
 
 0.792
AAWM_02126
UDP-glucose 4-epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family.
  
 
 0.748
AAWM_08008
Galactokinase.
  
 0.639
AAWM_06652
Uncharacterized protein Saci_1674.
  
 
 0.581
AAWM_03522
Nicotinamide-nucleotide adenylyltransferase; Belongs to the eukaryotic NMN adenylyltransferase family.
     
 0.517
AAWM_08314
Trans-1,2-dihydrobenzene-1,2-diol dehydrogenase.
  
  
 
0.515
AAWM_03738
Probable aspartate-semialdehyde dehydrogenase.
   
 
  0.514
AAWM_00729
Uncharacterized oxidoreductase C513.06c.
  
  
 
0.509
AAWM_08316
annotation not available
  
 
 0.473
AAWM_08527
dTDP-D-glucose 4,6-dehydratase.
  
 
 0.473
Your Current Organism:
Aspergillus awamori
NCBI taxonomy Id: 105351
Other names: A. awamori, ATCC 16877, Aspergillus awamorii, Aspergillus niger var. awamori, Aspergillus niger var. awamorii, CBS 557.65, ITEM 4509
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.