STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AAWM_04508Uncharacterized protein. (301 aa)    
Predicted Functional Partners:
AAWM_09767
Signaling protein YkoW.
    
 0.739
AAWM_05518
Glyco_hydro_114 domain-containing protein.
    
 0.695
AAWM_09821
Xyloglucanase.
    
 0.695
AAWM_09551
Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.
    
  0.686
AAWM_10174
Uncharacterized protein.
    
 0.664
AAWM_02957
Putative ankyrin repeat protein RF_0381.
    
 0.659
AAWM_05304
SGNH_hydro domain-containing protein.
    
 0.573
AAWM_06404
Chitin deacetylase ARB_04768.
    
 0.573
AAWM_10578
Probable endo-beta-1,4-glucanase D.
    
 0.573
AAWM_11078
Probable peptidoglycan-N-acetylglucosamine deacetylase ARB_03699.
    
 0.573
Your Current Organism:
Aspergillus awamori
NCBI taxonomy Id: 105351
Other names: A. awamori, ATCC 16877, Aspergillus awamorii, Aspergillus niger var. awamori, Aspergillus niger var. awamorii, CBS 557.65, ITEM 4509
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.