STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AAWM_04500Exopolygalacturonase X; Belongs to the glycosyl hydrolase 28 family. (435 aa)    
Predicted Functional Partners:
AAWM_10747
Probable alpha-L-arabinofuranosidase B.
     
 0.940
AAWM_05325
Probable alpha-L-arabinofuranosidase C.
     
 0.922
AAWM_02709
Endopolygalacturonase D.
  
 
0.907
AAWM_09222
Exo-1,4-beta-xylosidase xlnD.
    
 0.871
AAWM_01484
Endopolygalacturonase B.
  
  
 
0.851
AAWM_02886
Probable alpha-L-arabinofuranosidase A.
     
 0.842
AAWM_07462
Probable alpha-L-arabinofuranosidase A.
     
 0.842
AAWM_09947
Probable alpha-L-arabinofuranosidase A.
     
 0.842
AAWM_07272
Polygalacturonase.
  
  
 
0.784
AAWM_10552
Endopolygalacturonase II.
  
  
 
0.781
Your Current Organism:
Aspergillus awamori
NCBI taxonomy Id: 105351
Other names: A. awamori, ATCC 16877, Aspergillus awamorii, Aspergillus niger var. awamori, Aspergillus niger var. awamorii, CBS 557.65, ITEM 4509
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.