STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AAWM_04596Amine oxidase. (615 aa)    
Predicted Functional Partners:
AAWM_05672
Spermidine synthase; Belongs to the spermidine/spermine synthase family.
    
 0.831
AAWM_02831
Amine oxidase; Belongs to the copper/topaquinone oxidase family.
     
 0.800
AAWM_07473
Amine oxidase.
     
 0.800
AAWM_04904
Histone H4.2; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
    
 0.726
AAWM_03885
Histone H2B; Belongs to the histone H2B family.
    
  0.719
AAWM_05569
DNA damage-responsive transcriptional repressor RPH1.
   
 0.708
AAWM_00563
Histone deacetylase RPD3.
    
 0.706
AAWM_00600
Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.
    
 0.706
AAWM_02760
Amine oxidase.
  
  
 
0.686
AAWM_10166
Amine oxidase.
  
  
 
0.683
Your Current Organism:
Aspergillus awamori
NCBI taxonomy Id: 105351
Other names: A. awamori, ATCC 16877, Aspergillus awamorii, Aspergillus niger var. awamori, Aspergillus niger var. awamorii, CBS 557.65, ITEM 4509
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.