STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AAWM_04704RutC family protein PYRAB12510. (163 aa)    
Predicted Functional Partners:
AAWM_06753
Catabolic L-serine/threonine dehydratase.
  
 0.661
AAWM_01433
Elongation factor 2.
    
  0.650
AAWM_06724
Threonine dehydratase.
  
 0.612
AAWM_02656
Serine racemase.
  
 0.603
AAWM_06811
Acetolactate synthase small subunit, mitochondrial.
    
  0.588
AAWM_09393
Cell differentiation protein rcd1.
    
 
 0.549
AAWM_03505
General negative regulator of transcription subunit 4.
    
 
 0.548
AAWM_01697
Exosome complex component RRP42.
    
   0.535
AAWM_05636
Multifunctional tryptophan biosynthesis protein; Trifunctional enzyme bearing the Gln amidotransferase (GATase) domain of anthranilate synthase, indole-glycerolphosphate synthase, and phosphoribosylanthranilate isomerase activities.
  
 
 0.533
AAWM_00595
Exosome complex component ski6.
  
   0.526
Your Current Organism:
Aspergillus awamori
NCBI taxonomy Id: 105351
Other names: A. awamori, ATCC 16877, Aspergillus awamorii, Aspergillus niger var. awamori, Aspergillus niger var. awamorii, CBS 557.65, ITEM 4509
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.