STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AAWM_04781L-sorbose 1-dehydrogenase. (557 aa)    
Predicted Functional Partners:
AAWM_01884
Tankyrase-1.
    
  0.621
AAWM_08904
Anaphase-promoting complex subunit 10.
    
  0.491
AAWM_06652
Uncharacterized protein Saci_1674.
   
 
 0.487
AAWM_01276
Activator of stress genes 1.
    
  0.410
AAWM_02336
Nitrogen assimilation transcription factor nit-4.
    
  0.410
AAWM_02360
Cutinase transcription factor 1 alpha.
    
  0.410
AAWM_03941
Cutinase transcription factor 1 beta.
    
  0.410
AAWM_05882
Cutinase transcription factor 1 beta.
    
  0.410
AAWM_06122
Protein AIM2.
    
  0.410
AAWM_08261
UPF0317 protein C5H10.01.
    
  0.410
Your Current Organism:
Aspergillus awamori
NCBI taxonomy Id: 105351
Other names: A. awamori, ATCC 16877, Aspergillus awamorii, Aspergillus niger var. awamori, Aspergillus niger var. awamorii, CBS 557.65, ITEM 4509
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.