Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AAWM_01600 | AAWM_01723 | A0A401KHS5 | A0A401KHM0 | KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. | Probable U3 small nucleolar RNA-associated protein 7. | 0.999 |
AAWM_01600 | AAWM_03719 | A0A401KHS5 | A0A401KNI1 | KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. | Pre-rRNA-processing protein esf1. | 0.945 |
AAWM_01600 | AAWM_05068 | A0A401KHS5 | A0A401KSA9 | KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. | Protein sof1. | 0.998 |
AAWM_01600 | AAWM_05074 | A0A401KHS5 | A0A401KSG7 | KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. | ATP-dependent rRNA helicase rrp3; Belongs to the DEAD box helicase family. | 0.977 |
AAWM_01600 | AAWM_05445 | A0A401KHS5 | A0A401KTD1 | KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. | Something about silencing protein 10. | 0.999 |
AAWM_01600 | AAWM_06031 | A0A401KHS5 | A0A401KV33 | KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. | Uncharacterized protein C18B11.06. | 0.996 |
AAWM_01600 | AAWM_07685 | A0A401KHS5 | A0A401KZW2 | KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. | Probable nucleolar complex protein 14. | 0.999 |
AAWM_01600 | AAWM_09166 | A0A401KHS5 | A0A401L404 | KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. | ATP-dependent RNA helicase rok1. | 0.994 |
AAWM_01600 | AAWM_10427 | A0A401KHS5 | A0A401L7Q9 | KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. | rRNA biogenesis protein rrp5. | 0.999 |
AAWM_01600 | SPB1 | A0A401KHS5 | A0A401KRQ5 | KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. | AdoMet-dependent rRNA methyltransferase SPB1; Required for proper assembly of pre-ribosomal particles during the biogenesis of the 60S ribosomal subunit; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. SPB1 subfamily. | 0.834 |
AAWM_01723 | AAWM_01600 | A0A401KHM0 | A0A401KHS5 | Probable U3 small nucleolar RNA-associated protein 7. | KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. | 0.999 |
AAWM_01723 | AAWM_03719 | A0A401KHM0 | A0A401KNI1 | Probable U3 small nucleolar RNA-associated protein 7. | Pre-rRNA-processing protein esf1. | 0.846 |
AAWM_01723 | AAWM_05068 | A0A401KHM0 | A0A401KSA9 | Probable U3 small nucleolar RNA-associated protein 7. | Protein sof1. | 0.998 |
AAWM_01723 | AAWM_05074 | A0A401KHM0 | A0A401KSG7 | Probable U3 small nucleolar RNA-associated protein 7. | ATP-dependent rRNA helicase rrp3; Belongs to the DEAD box helicase family. | 0.980 |
AAWM_01723 | AAWM_05445 | A0A401KHM0 | A0A401KTD1 | Probable U3 small nucleolar RNA-associated protein 7. | Something about silencing protein 10. | 0.999 |
AAWM_01723 | AAWM_06031 | A0A401KHM0 | A0A401KV33 | Probable U3 small nucleolar RNA-associated protein 7. | Uncharacterized protein C18B11.06. | 0.995 |
AAWM_01723 | AAWM_07685 | A0A401KHM0 | A0A401KZW2 | Probable U3 small nucleolar RNA-associated protein 7. | Probable nucleolar complex protein 14. | 0.999 |
AAWM_01723 | AAWM_09166 | A0A401KHM0 | A0A401L404 | Probable U3 small nucleolar RNA-associated protein 7. | ATP-dependent RNA helicase rok1. | 0.974 |
AAWM_01723 | AAWM_10427 | A0A401KHM0 | A0A401L7Q9 | Probable U3 small nucleolar RNA-associated protein 7. | rRNA biogenesis protein rrp5. | 0.999 |
AAWM_01723 | SPB1 | A0A401KHM0 | A0A401KRQ5 | Probable U3 small nucleolar RNA-associated protein 7. | AdoMet-dependent rRNA methyltransferase SPB1; Required for proper assembly of pre-ribosomal particles during the biogenesis of the 60S ribosomal subunit; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. SPB1 subfamily. | 0.947 |
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