STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AAWM_05130Arabinogalactan endo-beta-1,4-galactanase. (351 aa)    
Predicted Functional Partners:
AAWM_00691
tRNA-specific adenosine deaminase subunit tad3.
   
 0.874
AAWM_06915
Probable thymidylate synthase.
  
 
 0.723
AAWM_02387
Thymidylate synthase.
  
 
 0.717
AAWM_06524
Xanthine dehydrogenase.
    
  0.607
AAWM_08571
Xanthine dehydrogenase.
    
  0.607
AAWM_03497
S-methyl-5'-thioadenosine phosphorylase; Catalyzes the reversible phosphorylation of S-methyl-5'- thioadenosine (MTA) to adenine and 5-methylthioribose-1-phosphate. Involved in the breakdown of MTA, a major by-product of polyamine biosynthesis. Responsible for the first step in the methionine salvage pathway after MTA has been generated from S-adenosylmethionine. Has broad substrate specificity with 6-aminopurine nucleosides as preferred substrates.
    
 0.605
AAWM_10935
Putative purine nucleoside phosphorylase.
    
 0.605
AAWM_04493
Protein arg-6, mitochondrial; In the N-terminal section; belongs to the acetylglutamate kinase family.
    
  0.603
AAWM_08543
Protein ARG5,6, mitochondrial.
    
  0.603
AAWM_04883
Probable tRNA(Ile)-lysidine synthase.
  
 
 0.589
Your Current Organism:
Aspergillus awamori
NCBI taxonomy Id: 105351
Other names: A. awamori, ATCC 16877, Aspergillus awamorii, Aspergillus niger var. awamori, Aspergillus niger var. awamorii, CBS 557.65, ITEM 4509
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