STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AAWM_05269Polyadenylate-binding protein 2. (189 aa)    
Predicted Functional Partners:
AAWM_11038
Nuclear cap-binding protein subunit 2.
    
0.959
AAWM_08962
Poly(A) polymerase; Polymerase that creates the 3'-poly(A) tail of mRNA's.
   
 0.954
AAWM_00236
U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family.
 
 
 0.939
AAWM_04982
Pre-mRNA-splicing factor ATP-dependent RNA helicase prp16.
    
  0.918
AAWM_00552
RNA-binding protein 8A.
  
 
 0.916
AAWM_11104
Cleavage stimulation factor subunit 2.
  
 
0.915
AAWM_01082
ATP-dependent RNA helicase fal1; Belongs to the DEAD box helicase family.
   
 0.907
AAWM_09233
Histone deacetylase complex subunit SAP18.
   
 0.904
AAWM_05270
E3 ubiquitin-protein ligase.
 
  
   0.900
AAWM_07518
Apoptotic chromatin condensation inducer in the nucleus.
   
 0.900
Your Current Organism:
Aspergillus awamori
NCBI taxonomy Id: 105351
Other names: A. awamori, ATCC 16877, Aspergillus awamorii, Aspergillus niger var. awamori, Aspergillus niger var. awamorii, CBS 557.65, ITEM 4509
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.