STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AAWM_05182Proteasome subunit beta type-6. (260 aa)    
Predicted Functional Partners:
AAWM_00175
Proteasome subunit alpha type.
   
 0.999
AAWM_00564
26S proteasome regulatory subunit rpn11.
   
 0.999
AAWM_01056
Proteasome subunit alpha type.
   
 0.999
AAWM_01346
Proteasome endopeptidase complex.
   
 0.999
AAWM_01596
Proteasome subunit alpha type.
   
0.999
AAWM_03382
Proteasome subunit beta type-2.
   
 0.999
AAWM_03530
Proteasome subunit alpha type.
   
 0.999
AAWM_05191
Proteasome subunit alpha type.
  
 0.999
AAWM_05180
Proteasome subunit beta; Belongs to the peptidase T1B family.
   
 0.999
AAWM_06791
Proteasome subunit beta.
   
0.999
Your Current Organism:
Aspergillus awamori
NCBI taxonomy Id: 105351
Other names: A. awamori, ATCC 16877, Aspergillus awamorii, Aspergillus niger var. awamori, Aspergillus niger var. awamorii, CBS 557.65, ITEM 4509
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.