STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AAWM_05411Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC). (1117 aa)    
Predicted Functional Partners:
AAWM_03936
Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).
   
 0.999
AAWM_06927
Nucleoporin NUP133.
   
 0.999
AAWM_01612
Nucleoporin SEH1; Belongs to the WD repeat SEC13 family.
   
 0.998
AAWM_06509
Nucleoporin NUP145.
   
 0.998
AAWM_06904
Protein transport protein sec13; Belongs to the WD repeat SEC13 family.
   
 0.998
AAWM_02430
Nucleoporin NIC96.
   
 0.994
AAWM_01945
Nucleoporin NUP192.
   
 0.992
AAWM_03383
Nucleoporin NUP159.
   
 0.991
AAWM_00142
Nucleoporin NUP170.
   
 0.985
AAWM_05370
Nucleoporin NUP120.
  
 0.985
Your Current Organism:
Aspergillus awamori
NCBI taxonomy Id: 105351
Other names: A. awamori, ATCC 16877, Aspergillus awamorii, Aspergillus niger var. awamori, Aspergillus niger var. awamorii, CBS 557.65, ITEM 4509
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