STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AAWM_05543GH131_N domain-containing protein. (389 aa)    
Predicted Functional Partners:
AAWM_10614
Cell cycle serine/threonine-protein kinase CDC5/MSD2.
    
 0.784
AAWM_01704
DNA-directed RNA polymerase II subunit RPB3.
    
 0.748
AAWM_04232
Serine/threonine-rich protein adg2.
   
 0.734
AAWM_02184
Actin-like protein arp5; Belongs to the actin family.
    
 0.731
AAWM_06486
RuvB-like helicase; DNA helicase participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes.
    
 0.729
AAWM_09640
DNA-directed RNA polymerases I, II, and III subunit RPABC2.
    
 0.725
AAWM_04904
Histone H4.2; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
    
 0.715
AAWM_03890
Uncharacterized protein.
    
  0.701
AAWM_01010
DNA-directed RNA polymerase II subunit rpb4.
    
  0.697
AAWM_09080
DNA-directed RNA polymerases I, II, and III subunit RPABC1.
    
  0.697
Your Current Organism:
Aspergillus awamori
NCBI taxonomy Id: 105351
Other names: A. awamori, ATCC 16877, Aspergillus awamorii, Aspergillus niger var. awamori, Aspergillus niger var. awamorii, CBS 557.65, ITEM 4509
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.