STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AAWM_05627Lymphoid-specific helicase. (892 aa)    
Predicted Functional Partners:
AAWM_04232
Serine/threonine-rich protein adg2.
    
 0.927
AAWM_04904
Histone H4.2; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
    
 0.908
AAWM_02567
Histone acetyltransferase type B subunit 2.
   
 0.860
AAWM_08189
Histone H2A; Belongs to the histone H2A family.
   
 0.860
AAWM_03885
Histone H2B; Belongs to the histone H2B family.
   
 0.848
AAWM_06014
DNA damage-binding protein CMR1; DNA-binding protein that binds to both single- and double- stranded DNA. Binds preferentially to UV-damaged DNA. May be involved in DNA-metabolic processes.
    
 0.837
AAWM_08125
Exodeoxyribonuclease 1.
   
 0.830
AAWM_10041
Cell division control protein; Belongs to the CDC6/cdc18 family.
   
 
 0.811
AAWM_09640
DNA-directed RNA polymerases I, II, and III subunit RPABC2.
    
 0.806
AAWM_05384
DNA polymerase epsilon subunit D.
    
 0.802
Your Current Organism:
Aspergillus awamori
NCBI taxonomy Id: 105351
Other names: A. awamori, ATCC 16877, Aspergillus awamorii, Aspergillus niger var. awamori, Aspergillus niger var. awamorii, CBS 557.65, ITEM 4509
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.