AAWM_05805 protein (Aspergillus awamori) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

AAWM_05805

Uncharacterized protein. (1228 aa)

Predicted Functional Partners:

AAWM_04925

0.692

AAWM_10583

0.692

AAWM_00635

0.665

AAWM_05610

0.665

AAWM_06908

0.535

AAWM_03154

0.457

AAWM_01152

0.456

AAWM_06470

0.455

AAWM_00610

0.453

AAWM_03891

0.453

Your Current Organism:

Aspergillus awamori

NCBI taxonomy Id: 105351
Other names: A. awamori, ATCC 16877, Aspergillus awamorii, Aspergillus niger var. awamori, Aspergillus niger var. awamorii, CBS 557.65, ITEM 4509

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AAWM_00610	AAWM_01152	A0A401KEU9	A0A401KG66	U3 small nucleolar RNA-associated protein 4.	Nucleolar protein 58.	0.998
AAWM_00610	AAWM_03154	A0A401KEU9	A0A401KM20	U3 small nucleolar RNA-associated protein 4.	U3 small nucleolar RNA-associated protein 20.	0.997
AAWM_00610	AAWM_03891	A0A401KEU9	A0A401KP33	U3 small nucleolar RNA-associated protein 4.	U3 small nucleolar RNA-associated protein 17.	0.999
AAWM_00610	AAWM_05805	A0A401KEU9	A0A401KUF3	U3 small nucleolar RNA-associated protein 4.	Uncharacterized protein.	0.453
AAWM_00610	AAWM_06470	A0A401KEU9	A0A401KWE4	U3 small nucleolar RNA-associated protein 4.	U3 small nucleolar RNA-associated protein 5.	0.999
AAWM_00635	AAWM_04925	A0A401KEK6	A0A401KRY1	Nitrate reductase [NADH] 1.	Glycerophosphodiester phosphodiesterase GDE1.	0.455
AAWM_00635	AAWM_05610	A0A401KEK6	A0A401KU06	Nitrate reductase [NADH] 1.	Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.	0.969
AAWM_00635	AAWM_05805	A0A401KEK6	A0A401KUF3	Nitrate reductase [NADH] 1.	Uncharacterized protein.	0.665
AAWM_00635	AAWM_06908	A0A401KEK6	A0A401KXH8	Nitrate reductase [NADH] 1.	Ankyrin repeat protein nuc-2.	0.450
AAWM_00635	AAWM_10583	A0A401KEK6	A0A401L874	Nitrate reductase [NADH] 1.	Glycerophosphodiester phosphodiesterase GDE1.	0.455
AAWM_01152	AAWM_00610	A0A401KG66	A0A401KEU9	Nucleolar protein 58.	U3 small nucleolar RNA-associated protein 4.	0.998
AAWM_01152	AAWM_03154	A0A401KG66	A0A401KM20	Nucleolar protein 58.	U3 small nucleolar RNA-associated protein 20.	0.992
AAWM_01152	AAWM_03891	A0A401KG66	A0A401KP33	Nucleolar protein 58.	U3 small nucleolar RNA-associated protein 17.	0.998
AAWM_01152	AAWM_05805	A0A401KG66	A0A401KUF3	Nucleolar protein 58.	Uncharacterized protein.	0.456
AAWM_01152	AAWM_06470	A0A401KG66	A0A401KWE4	Nucleolar protein 58.	U3 small nucleolar RNA-associated protein 5.	0.998
AAWM_03154	AAWM_00610	A0A401KM20	A0A401KEU9	U3 small nucleolar RNA-associated protein 20.	U3 small nucleolar RNA-associated protein 4.	0.997
AAWM_03154	AAWM_01152	A0A401KM20	A0A401KG66	U3 small nucleolar RNA-associated protein 20.	Nucleolar protein 58.	0.992
AAWM_03154	AAWM_03891	A0A401KM20	A0A401KP33	U3 small nucleolar RNA-associated protein 20.	U3 small nucleolar RNA-associated protein 17.	0.998
AAWM_03154	AAWM_05805	A0A401KM20	A0A401KUF3	U3 small nucleolar RNA-associated protein 20.	Uncharacterized protein.	0.457
AAWM_03154	AAWM_06470	A0A401KM20	A0A401KWE4	U3 small nucleolar RNA-associated protein 20.	U3 small nucleolar RNA-associated protein 5.	0.992

page 1 of 3

Server load: low (22%) [HD]

Permalink

Network

Neighborhood

Experiments

Cooccurrence

Databases

Coexpression

Textmining

Fusion

© STRING Consortium 2023

Credits

Access

Info

About