STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AAWM_058793-hydroxybutyryl-CoA dehydrogenase. (295 aa)    
Predicted Functional Partners:
AAWM_10272
Low-density lipoprotein receptor-related protein 5.
 
     0.917
AAWM_10314
Low-density lipoprotein receptor-related protein 6.
 
     0.915
AAWM_07662
Acetyl-CoA acetyltransferase IA; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.877
AAWM_05595
3-ketoacyl-CoA thiolase, peroxisomal.
  
 0.861
AAWM_06504
3-ketoacyl-CoA thiolase, peroxisomal; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.861
AAWM_01603
3-ketoacyl-CoA thiolase, peroxisomal; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.853
AAWM_10017
3-ketoacyl-CoA thiolase, peroxisomal; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.853
AAWM_06039
Uncharacterized protein.
  
 0.851
AAWM_10124
Acetyl-CoA acetyltransferase A, mitochondrial.
  
 0.851
AAWM_01641
Probable enoyl-CoA hydratase, mitochondrial; Belongs to the enoyl-CoA hydratase/isomerase family.
 
 0.795
Your Current Organism:
Aspergillus awamori
NCBI taxonomy Id: 105351
Other names: A. awamori, ATCC 16877, Aspergillus awamorii, Aspergillus niger var. awamori, Aspergillus niger var. awamorii, CBS 557.65, ITEM 4509
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.