STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AAWM_05996Mitochondrial RNA-splicing protein MRS3; Belongs to the mitochondrial carrier (TC 2.A.29) family. (334 aa)    
Predicted Functional Partners:
AAWM_08083
Asparagine--tRNA ligase, mitochondrial.
 
   
  0.942
AAWM_06012
Autophagy-related protein 9; Involved in autophagy and cytoplasm to vacuole transport (Cvt) vesicle formation. Plays a key role in the organization of the preautophagosomal structure/phagophore assembly site (PAS), the nucleating site for formation of the sequestering vesicle. Belongs to the ATG9 family.
 
      0.822
AAWM_05997
E3 ubiquitin-protein ligase dbl4.
 
  
 
 0.797
AAWM_06466
Frataxin homolog, mitochondrial.
    
 
 0.735
AAWM_00818
Asparagine--tRNA ligase, cytoplasmic.
 
   
  0.664
AAWM_07180
Uncharacterized protein.
    
 
 0.581
AAWM_08002
(S)-2-haloacid dehalogenase 4A.
    
 
 0.559
AAWM_10626
(S)-2-haloacid dehalogenase 1.
    
 
 0.559
AAWM_08047
Protein CCC1.
    
 
 0.552
AAWM_09379
Protein CCC1.
    
 
 0.552
Your Current Organism:
Aspergillus awamori
NCBI taxonomy Id: 105351
Other names: A. awamori, ATCC 16877, Aspergillus awamorii, Aspergillus niger var. awamori, Aspergillus niger var. awamorii, CBS 557.65, ITEM 4509
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.