STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AAWM_06686DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR). (1210 aa)    
Predicted Functional Partners:
AAWM_08060
DNA mismatch repair protein msh-2; Component of the post-replicative DNA mismatch repair system (MMR).
  
0.999
AAWM_04914
DNA mismatch repair protein MLH1.
 
 0.992
AAWM_01675
Mismatch repair endonuclease PMS2.
 
 0.991
AAWM_07741
MutS protein homolog 1.
  
0.990
AAWM_09663
Inheritance of peroxisomes protein 2.
   
 0.981
AAWM_09665
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
   
 0.981
AAWM_10057
DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR).
  
 
0.981
AAWM_10599
PMS1 protein homolog 1.
 
 0.978
AAWM_08125
Exodeoxyribonuclease 1.
   
 0.970
AAWM_00755
Replication protein A subunit; As part of the replication protein A (RPA/RP-A), a single- stranded DNA-binding heterotrimeric complex, may play an essential role in DNA replication, recombination and repair. Binds and stabilizes single-stranded DNA intermediates, preventing complementary DNA reannealing and recruiting different proteins involved in DNA metabolism.
   
 0.946
Your Current Organism:
Aspergillus awamori
NCBI taxonomy Id: 105351
Other names: A. awamori, ATCC 16877, Aspergillus awamorii, Aspergillus niger var. awamori, Aspergillus niger var. awamorii, CBS 557.65, ITEM 4509
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