STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AAWM_06850Linear gramicidin synthase subunit D. (1017 aa)    
Predicted Functional Partners:
AAWM_00098
Lovastatin diketide synthase LovF.
 
 
  0.947
AAWM_07377
6-methylsalicylic acid synthase.
 
 
  0.924
AAWM_06832
Putative peroxisomal-coenzyme A synthetase.
 
 
 
0.874
AAWM_00388
Putative acyl-CoA synthetase YngI.
 
 
 
0.843
AAWM_05106
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
  
 0.829
AAWM_01101
Polyketide synthase PksJ.
 
 
  0.828
AAWM_09095
Polyketide synthase PksJ.
 
 
 
0.804
AAWM_03578
Conidial yellow pigment biosynthesis polyketide synthase.
 
 
  0.797
AAWM_05729
Acyl-CoA synthetase family member 3, mitochondrial.
 
 
 
0.757
AAWM_01687
Tryptophan synthase.
   
 
 0.745
Your Current Organism:
Aspergillus awamori
NCBI taxonomy Id: 105351
Other names: A. awamori, ATCC 16877, Aspergillus awamorii, Aspergillus niger var. awamori, Aspergillus niger var. awamorii, CBS 557.65, ITEM 4509
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.